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New Image Reconstruction Technique Combines Data Science with ML for Faster MRIs

By MedImaging International staff writers
Posted on 15 Sep 2022

Image: New research closes the gap between traditional and deep learning methods (Photo courtesy of University of Minnesota)

For the last decade or so, scientists have been making Magnetic Resonance Imaging (MRI) faster using a technique called compressed sensing, which uses the idea that images can be compressed into smaller sizes, akin to zipping a .jpeg on a computer. More recently, researchers have been looking into using deep learning, a type of machine learning, to speed up MRI image reconstruction. Instead of capturing every frequency during the MRI procedure, this process skips over frequencies and uses a trained machine learning algorithm to predict the results and fill in those gaps.

Many studies have shown deep learning to be better than traditional compressed sensing by a large margin. However, there are some concerns with using deep learning - for example, having insufficient training data could create a bias in the algorithm that might cause it to misinterpret the MRI results. Now, using a combination of modern data science tools and machine learning ideas, researchers have found a way to fine-tune the traditional compressing method to make it nearly as high-quality as deep learning. This finding by scientists and engineers at the University of Minnesota (Minneapolis, MN, USA) provides a new research direction for the field of MRI reconstruction. It can improve the performance of traditional MRI reconstruction techniques, allowing for faster MRIs to improve healthcare.

“MRIs take a long time because you’re acquiring the data in a sequential manner. You have to fill up the frequency space of your image in a successive manner,” explained Mehmet Akcakaya, the Jim and Sara Anderson Associate Professor in the University of Minnesota Department of Electrical and Computer Engineering. “We want to make MRIs faster so that patients are there for shorter times and so that we can increase the efficiency in the healthcare system.”

“What we’re saying is that there’s a lot of hype surrounding deep learning in MRIs, but maybe that gap between new and traditional methods isn’t as big as previously reported,” Akcakaya said. “We found that if you tune the classical methods, they can perform very well. So, maybe we should go back and look at the classical methods and see if we can get better results. There is a lot of great research surrounding deep learning as well, but we’re trying to look at both sides of the picture to see where we can find the best performance, theoretical guarantees, and stability.”

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69 (34.093856811523): SELECT id,name,sponsor_text FROM jos_deeppockets dp left outer join jos_channel_sponsor cs on dp.id=cs.fid WHERE cat=10 AND TYPE='file_folder' AND published=1 AND id=212 ORDER BY `ordering`

70 (154.97207641602): SELECT fid FROM jos_deeppockets WHERE cat=10 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

71 (187.15858459473): SELECT fid FROM jos_deeppockets_archive WHERE cat=10 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

72 (39.100646972656): SELECT id,name,title FROM jos_deeppockets WHERE cat=10 AND TYPE='file_folder' AND published=1 AND id != 294743300 AND id != 294743301 AND id != 294743302 AND id != 294743303 AND id != 294743304 AND id != 294743305 AND id != 294743306 AND id != 294743307 AND id != 294743308 AND id != 294743309 AND id != 294743310 AND metakey != 'aacc' ORDER BY `ordering`

73 (50.067901611328): SELECT show_live FROM jos_com_show_setting LIMIT 1

74 (34.093856811523): SELECT show_live FROM jos_com_show_setting LIMIT 1

75 (25.98762512207): SELECT show_live FROM jos_com_show_setting LIMIT 1

76 (25.033950805664): SELECT show_live FROM jos_com_show_setting LIMIT 1

77 (198.1258392334): SELECT show_live FROM jos_com_show_setting LIMIT 1

78 (41.007995605469): SELECT show_live FROM jos_com_show_setting LIMIT 1

79 (28.848648071289): SELECT show_live FROM jos_com_show_setting LIMIT 1

80 (25.98762512207): SELECT show_live FROM jos_com_show_setting LIMIT 1

81 (33.140182495117): SELECT show_live FROM jos_com_show_setting LIMIT 1

82 (34.093856811523): SELECT show_live FROM jos_com_show_setting LIMIT 1

83 (!!!!! 3504.9915313721): SELECT show_live FROM jos_com_show_setting LIMIT 1

84 (80.82389831543): SELECT show_live FROM jos_com_show_setting LIMIT 1

85 (56.028366088867): SELECT show_live FROM jos_com_show_setting LIMIT 1

86 (28.848648071289): SELECT show_live FROM jos_com_show_setting LIMIT 1

87 (59.843063354492): SELECT fid FROM jos_deeppockets WHERE cat=10 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

88 (28.133392333984): SELECT fid FROM jos_deeppockets_archive WHERE cat=10 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

89 (31.948089599609): SELECT id,name,title FROM jos_deeppockets WHERE cat=10 AND TYPE='file_folder' AND published=1 AND id != 294743300 AND id != 294743301 AND id != 294743302 AND id != 294743303 AND id != 294743304 AND id != 294743305 AND id != 294743306 AND id != 294743307 AND id != 294743308 AND id != 294743309 AND id != 294743310 AND metakey != 'aacc' ORDER BY `ordering`

90 (67.949295043945): SELECT show_live FROM jos_com_show_setting LIMIT 1

91 (36.001205444336): SELECT show_live FROM jos_com_show_setting LIMIT 1

92 (25.98762512207): SELECT show_live FROM jos_com_show_setting LIMIT 1

93 (25.033950805664): SELECT show_live FROM jos_com_show_setting LIMIT 1

94 (72.002410888672): SELECT show_live FROM jos_com_show_setting LIMIT 1

95 (26.941299438477): SELECT show_live FROM jos_com_show_setting LIMIT 1

96 (25.98762512207): SELECT show_live FROM jos_com_show_setting LIMIT 1

97 (25.033950805664): SELECT show_live FROM jos_com_show_setting LIMIT 1

98 (25.033950805664): SELECT show_live FROM jos_com_show_setting LIMIT 1

99 (67.949295043945): SELECT show_live FROM jos_com_show_setting LIMIT 1

100 (31.948089599609): SELECT show_live FROM jos_com_show_setting LIMIT 1

101 (25.98762512207): SELECT show_live FROM jos_com_show_setting LIMIT 1

102 (25.033950805664): SELECT show_live FROM jos_com_show_setting LIMIT 1

103 (24.080276489258): SELECT show_live FROM jos_com_show_setting LIMIT 1

104 (66.995620727539): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

105 (52.213668823242): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

106 (56.028366088867): SELECT dp.*, ch.title as channel, exp.name as author_name, exp.specialization as author_specialization, exp.images as author_photo FROM jos_deeppockets as dp LEFT JOIN jos_experts as exp ON exp.id = dp.author LEFT JOIN jos_deeppockets as ch ON dp.fid = ch.id WHERE 1=1 AND dp.cat=10 AND dp.id=294794584 AND (dp.type='deeppockets_item' OR dp.type='deeppockets_item_link') AND dp.published='1' LIMIT 1

107 (45.061111450195): SELECT dp.*, ch.title as channel, exp.name as author_name, exp.specialization as author_specialization, exp.images as author_photo FROM jos_deeppockets_archive as dp LEFT JOIN jos_experts as exp ON exp.id = dp.author LEFT JOIN jos_deeppockets as ch ON dp.fid = ch.id WHERE 1=1 AND dp.cat=10 AND dp.id=294794584 AND (dp.type='deeppockets_item' OR dp.type='deeppockets_item_link') AND dp.published='1' LIMIT 1

108 (63.896179199219): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

109 (50.067901611328): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

110 (46.014785766602): SELECT dp.*, ch.title as channel, exp.name as author_name, exp.specialization as author_specialization, exp.images as author_photo FROM jos_deeppockets as dp LEFT JOIN jos_experts as exp ON exp.id = dp.author LEFT JOIN jos_deeppockets as ch ON dp.fid = ch.id WHERE 1=1 AND dp.id=294794584 AND (dp.type='deeppockets_item' OR dp.type='deeppockets_item_link') AND dp.published='1' LIMIT 1

111 (495.91064453125): SELECT dp.*, ch.title as channel, exp.name as author_name, exp.specialization as author_specialization, exp.images as author_photo FROM jos_deeppockets_archive as dp LEFT JOIN jos_experts as exp ON exp.id = dp.author LEFT JOIN jos_deeppockets as ch ON dp.fid = ch.id WHERE 1=1 AND dp.id=294794584 AND (dp.type='deeppockets_item' OR dp.type='deeppockets_item_link') AND dp.published='1' LIMIT 1

112 (!!!!! 5504.1313171387): SELECT dp.name, dp.id, dp2.name as channel, ex.name as author_name, ex.specialization, ex.images FROM jos_deeppockets as dp LEFT JOIN jos_experts as ex ON ex.id = dp.author LEFT JOIN jos_deeppockets as dp2 ON dp2.id = dp.fid WHERE dp.author != 0 AND dp.cat = 10 AND dp.published = 1 AND ( (dp.fid = 294743300) OR (dp.fid = 294743301) OR (dp.fid = 294743302) OR (dp.fid = 294743303) OR (dp.fid = 294743304) OR (dp.fid = 294743305) OR (dp.fid = 294743306) OR (dp.fid = 294743307) OR (dp.fid = 294743308) OR (dp.fid = 294743309) OR (dp.fid = 294743310) ) ORDER BY RAND() LIMIT 1

113 (810.14633178711): SELECT dp.name, dp.id, dp2.name as channel, ex.name as author_name, ex.specialization, ex.images FROM jos_deeppockets as dp LEFT JOIN jos_experts as ex ON ex.id = dp.author LEFT JOIN jos_deeppockets as dp2 ON dp2.id = dp.fid WHERE dp.author != 0 AND dp.cat = 10 AND dp.published = 1 AND ( (dp.fid = 294743300) OR (dp.fid = 294743301) OR (dp.fid = 294743302) OR (dp.fid = 294743303) OR (dp.fid = 294743304) OR (dp.fid = 294743305) OR (dp.fid = 294743306) OR (dp.fid = 294743307) OR (dp.fid = 294743308) OR (dp.fid = 294743309) OR (dp.fid = 294743310) ) ORDER BY RAND() LIMIT 1

114 (163.07830810547): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

115 (216.96090698242): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

116 (204.08630371094): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

117 (941.03813171387): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

118 (!!!!! 2348.1845855713): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

119 (205.99365234375): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

120 (167.1314239502): SELECT * FROM trending_articles WHERE `journal_id` = 10 AND `timestamp` <= NOW() + INTERVAL 7 DAY ORDER BY `order`

121 (!!!!! 139647.00698853): SELECT * FROM jos_deeppockets WHERE jos_deeppockets.cat = 10 AND jos_deeppockets.type = 'deeppockets_item' AND jos_deeppockets.published = 1 AND jos_deeppockets.created + INTERVAL 14 DAY >= NOW() ORDER BY jos_deeppockets.hits DESC LIMIT 7

122 (!!!!! 2273.0827331543): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

123 (61.988830566406): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

124 (!!!!! 3376.0070800781): SELECT fid FROM jos_deeppockets WHERE cat=10 AND id=294794584 AND type='deeppockets_item' AND published='1' union SELECT fid FROM jos_deeppockets_archive WHERE cat=10 AND id=294794584 AND type='deeppockets_item' AND published='1' LIMIT 1

125 (!!!!! 1551051.1398315): ( SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.video != '' AND dp.video_source != '' AND dp.cat = 10 AND dp.published = 1 AND dp.type != 'deeppockets_item_link' ORDER BY created DESC LIMIT 3 ) UNION ( SELECT dpa.id, dpa.name, dpa.title, dpa.video, dpa.video_source, dpa.created FROM jos_deeppockets_archive AS dpa WHERE dpa.video != '' AND dpa.video_source != '' AND dpa.cat = 10 AND dpa.published = 1 AND dpa.type != 'deeppockets_item_link' ORDER BY created DESC LIMIT 3 ) ORDER BY created DESC LIMIT 3

126 (!!!!! 839855.90934753): ( SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.video != '' AND dp.video_source != '' AND dp.cat = 10 AND dp.published = 1 AND dp.type != 'deeppockets_item_link' ORDER BY created DESC LIMIT 3 ) UNION ( SELECT dpa.id, dpa.name, dpa.title, dpa.video, dpa.video_source, dpa.created FROM jos_deeppockets_archive AS dpa WHERE dpa.video != '' AND dpa.video_source != '' AND dpa.cat = 10 AND dpa.published = 1 AND dpa.type != 'deeppockets_item_link' ORDER BY created DESC LIMIT 3 ) ORDER BY created DESC LIMIT 3

127 (225.06713867188): SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.id = 294800513 LIMIT 1

128 (241.04118347168): SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.id = 294800513 LIMIT 1

129 (277.99606323242): SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.id = 294800359 LIMIT 1

130 (250.10108947754): SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.id = 294800359 LIMIT 1

131 (257.01522827148): SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.id = 294800361 LIMIT 1

132 (247.00164794922): SELECT dp.id, dp.name, dp.title, dp.video, dp.video_source, dp.created FROM jos_deeppockets AS dp WHERE dp.id = 294800361 LIMIT 1

133 (!!!!! 1003.0269622803): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

134 (!!!!! 1389.9803161621): SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

135 (!!!!! 1851.0818481445): SELECT name FROM jos_deeppockets WHERE id=212

136 (!!!!! 1299.1428375244): SELECT name FROM jos_deeppockets WHERE id=212

137 (!!!!! 5278.1105041504): SELECT *, DATE_FORMAT(publish_up,'%d %b %Y') AS date_publish_up, DATE_FORMAT(publish_down,'%d %b %Y') AS date_publish_down FROM jos_events WHERE state=1 AND publish_up > NOW() and extra_info REGEXP '((;)|(^))212((;)|($))' AND catid IN (0,110) ORDER BY publish_up ASC LIMIT 3

138 (954.86640930176): SELECT *, DATE_FORMAT(publish_up,'%d %b %Y') AS date_publish_up, DATE_FORMAT(publish_down,'%d %b %Y') AS date_publish_down FROM jos_events WHERE state=1 AND publish_up > NOW() and extra_info REGEXP '((;)|(^))212((;)|($))' AND catid IN (0,110) ORDER BY publish_up ASC LIMIT 3

139 (!!!!! 1899.0039825439): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

140 (165.93933105469): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

141 (!!!!! 10967.969894409): TRUNCATE TABLE jos_trademed_module

142 (160.93254089355): SELECT dp.*, ch.title as channel, exp.name as author_name, exp.specialization as author_specialization, exp.images as author_photo FROM jos_deeppockets as dp LEFT JOIN jos_experts as exp ON exp.id = dp.author LEFT JOIN jos_deeppockets as ch ON dp.fid = ch.id WHERE 1=1 AND dp.cat=10 AND dp.id=294794584 AND (dp.type='deeppockets_item' OR dp.type='deeppockets_item_link') AND dp.published='1' LIMIT 1

143 (472.06878662109): SELECT dp.*, ch.title as channel, exp.name as author_name, exp.specialization as author_specialization, exp.images as author_photo FROM jos_deeppockets_archive as dp LEFT JOIN jos_experts as exp ON exp.id = dp.author LEFT JOIN jos_deeppockets as ch ON dp.fid = ch.id WHERE 1=1 AND dp.cat=10 AND dp.id=294794584 AND (dp.type='deeppockets_item' OR dp.type='deeppockets_item_link') AND dp.published='1' LIMIT 1

144 (270.84350585938): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

145 (56.982040405273): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND (type='deeppockets_item' OR type='deeppockets_item_link') AND published='1' LIMIT 1

146 (48.87580871582): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

147 (41.007995605469): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

148 (!!!!! 1000.8811950684): SELECT jos_item.* FROM jos_item INNER JOIN jos_number ON jos_item.numberID=jos_number.id WHERE 1=1 AND (jos_item.imgMini<>'') AND jos_item.type='L' AND jos_item.numberID= ( SELECT jos_number.id FROM jos_number WHERE jos_number.journalID IN (10) and jos_number.id in (select distinct jos_number.id from jos_number join jos_item on jos_item.numberid=jos_number.id where jos_item.type='P') ORDER BY (CONVERT(SUBSTRING(issue,1,2),SIGNED) + (CONVERT(SUBSTRING(issue,3,2),SIGNED)*100)) DESC LIMIT 0,1 ) ORDER BY RAND() DESC LIMIT 6

149 (227.21290588379): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

150 (46.014785766602): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

151 (351.90582275391): SELECT fid FROM jos_deeppockets WHERE cat=10 AND id=294794584 AND type='deeppockets_item' AND published='1' union SELECT fid FROM jos_deeppockets_archive WHERE cat=10 AND id=294794584 AND type='deeppockets_item' AND published='1' LIMIT 1

152 (!!!!! 1393.0797576904): select distinct links.* from jos_textlinks links join jos_textlinks_placement placement on links.id=placement.link_id where journal_id=(10) and (channel_id=212 or channel_id is null)

153 (442.9817199707): select distinct links.* from jos_textlinks links join jos_textlinks_placement placement on links.id=placement.link_id where journal_id=(10) and (channel_id=212 or channel_id is null)

154 (41.007995605469): SELECT livesite FROM jos_dp_categories WHERE id=10 AND published='1' LIMIT 1

155 (64.13459777832): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

156 (46.968460083008): SELECT * FROM jos_deeppockets WHERE 1=1 AND id=294794584 AND published='1' union SELECT * FROM jos_deeppockets_archive WHERE 1=1 AND id=294794584 AND published='1' LIMIT 1

157 (!!!!! 10057.926177979): select jos_twitters.link from jos_twitters where cat=10

158 (!!!!! 15969.99168396): select jos_facebook.link from jos_facebook where cat=10

159 (!!!!! 2360.1055145264): select jos_google_plus.link from jos_google_plus where cat=10

160 (219.82192993164): select jos_linkedin.link from jos_linkedin where cat=10

161 (251.05476379395): update jos_bannersmanager_banner set impmade=impmade+1 where id in(14615,14202,14203)

162 (995.87440490723): insert into jos_banners_delta values (14615,'2025-04-30 20:45:15','18.225.34.193','view'),(14202,'2025-04-30 20:45:15','18.225.34.193','view'),(14203,'2025-04-30 20:45:15','18.225.34.193','view')

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